Shape_Type

Bases: NBOBaseClass

Represents the XML complex type Shape.

The shape element contains a single specific ROI shape and links that to any channels, and a timepoint and a z-section. It also records any transform applied to the ROI shape.

getTypeName()

Returns the class type name.

Returns:

Type	Description
string	The class type name

getXMLName()

Returns the XML element name corresponding to this class.

Returns:

Type	Description
string	The XML element name

getNBOType()

Returns the NBO Type corresponding to this class.

Returns:

Type	Description
int	The NBO Type value

getChildren()

Returns a list of all classes derived from this class.

Returns:

Type	Description
List[NBOBaseClass]	The list of derived classes

getSubElements()

Returns a list of all child elements contained in this class.

Returns:

Type	Description
List[NBOBaseClass]	The list of child classes

fromJsonFile(path)

Populates this object from a JSON file.

Parameters:

Name	Type	Description	Default
path	string	The path to the JSON file	required

fromJsonString(json_string)

Populates this object from a JSON string.

Parameters:

Name	Type	Description	Default
json_string	string	The JSON content as a string	required

fromXmlFile(path)

Populates this object from a XML file.

Parameters:

Name	Type	Description	Default
path	string	The path to the XML file	required

fromXmlString(xml_string)

Populates this object from a XML string.

Parameters:

Name	Type	Description	Default
xml_string	string	The XML content as a string	required

toXmlFile(filename)

Serializes this object to an XML file.

Parameters:

Name	Type	Description	Default
filename	string	The path to the output XML file	required

toXmlString()

Serializes this object to an XML string.

Returns:

Type	Description
string	A string containing the XML representation of this object

setFillColor(value)

Sets the value of the FillColor attribute.

The color of the fill - encoded as RGBA The value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value) NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.

Parameters:

Name	Type	Description	Default
value	Color_Type	The value to set	required

getFillColor()

Returns the value of the FillColor attribute.

The color of the fill - encoded as RGBA The value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value) NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.

Returns:

Type	Description
Color_Type	The value of the attribute

resetFillColor()

Resets the FillColor attribute to an unset state.

The color of the fill - encoded as RGBA The value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value) NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.

hasFillColor()

Checks whether the optional FillColor attribute is present.

The color of the fill - encoded as RGBA The value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value) NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.

Returns:

Type	Description
boolean	true if the optional attribute has been set, false otherwise

setFillRule(value)

Sets the value of the FillRule attribute.

The rule used to decide which parts of the shape to fill. [enumeration]

Parameters:

Name	Type	Description	Default
value	string	The value to set	required

getFillRule()

Returns the value of the FillRule attribute.

The rule used to decide which parts of the shape to fill. [enumeration]

Returns:

Type	Description
string	The value of the attribute

resetFillRule()

Resets the FillRule attribute to an unset state.

The rule used to decide which parts of the shape to fill. [enumeration]

hasFillRule()

Checks whether the optional FillRule attribute is present.

The rule used to decide which parts of the shape to fill. [enumeration]

Returns:

Type	Description
boolean	true if the optional attribute has been set, false otherwise

setStrokeColor(value)

Sets the value of the StrokeColor attribute.

The color of the stroke - encoded as RGBA The value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value) NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.

Parameters:

Name	Type	Description	Default
value	Color_Type	The value to set	required

getStrokeColor()

Returns the value of the StrokeColor attribute.

The color of the stroke - encoded as RGBA The value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value) NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.

Returns:

Type	Description
Color_Type	The value of the attribute

resetStrokeColor()

Resets the StrokeColor attribute to an unset state.

The color of the stroke - encoded as RGBA The value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value) NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.

hasStrokeColor()

Checks whether the optional StrokeColor attribute is present.

The color of the stroke - encoded as RGBA The value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value) NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.

Returns:

Type	Description
boolean	true if the optional attribute has been set, false otherwise

setStrokeWidth(value)

Sets the value of the StrokeWidth attribute.

The width of the stroke. Units are set by StrokeWidthUnit.

Parameters:

Name	Type	Description	Default
value	float	The value to set	required

getStrokeWidth()

Returns the value of the StrokeWidth attribute.

The width of the stroke. Units are set by StrokeWidthUnit.

Returns:

Type	Description
float	The value of the attribute

resetStrokeWidth()

Resets the StrokeWidth attribute to an unset state.

The width of the stroke. Units are set by StrokeWidthUnit.

hasStrokeWidth()

Checks whether the optional StrokeWidth attribute is present.

The width of the stroke. Units are set by StrokeWidthUnit.

Returns:

Type	Description
boolean	true if the optional attribute has been set, false otherwise

setStrokeWidthUnit(value)

Sets the value of the StrokeWidthUnit attribute.

The units used for the stroke width.

Parameters:

Name	Type	Description	Default
value	UnitsLength_Type	The value to set	required

getStrokeWidthUnit()

Returns the value of the StrokeWidthUnit attribute.

The units used for the stroke width.

Returns:

Type	Description
UnitsLength_Type	The value of the attribute

resetStrokeWidthUnit()

Resets the StrokeWidthUnit attribute to an unset state.

The units used for the stroke width.

hasStrokeWidthUnit()

Checks whether the optional StrokeWidthUnit attribute is present.

The units used for the stroke width.

Returns:

Type	Description
boolean	true if the optional attribute has been set, false otherwise

setStrokeDashArray(value)

Sets the value of the StrokeDashArray attribute.

e.g....................... "none", "10 20 30 10"

Parameters:

Name	Type	Description	Default
value	string	The value to set	required

getStrokeDashArray()

Returns the value of the StrokeDashArray attribute.

e.g....................... "none", "10 20 30 10"

Returns:

Type	Description
string	The value of the attribute

resetStrokeDashArray()

Resets the StrokeDashArray attribute to an unset state.

e.g....................... "none", "10 20 30 10"

hasStrokeDashArray()

Checks whether the optional StrokeDashArray attribute is present.

e.g....................... "none", "10 20 30 10"

Returns:

Type	Description
boolean	true if the optional attribute has been set, false otherwise

setText(value)

Sets the value of the Text attribute.

No description available in the XSD standard.

Parameters:

Name	Type	Description	Default
value	string	The value to set	required

getText()

Returns the value of the Text attribute.

No description available in the XSD standard.

Returns:

Type	Description
string	The value of the attribute

resetText()

Resets the Text attribute to an unset state.

No description available in the XSD standard.

hasText()

Checks whether the optional Text attribute is present.

No description available in the XSD standard.

Returns:

Type	Description
boolean	true if the optional attribute has been set, false otherwise

setFontFamily(value)

Sets the value of the FontFamily attribute.

The font family used to draw the text. [enumeration] Note: these values are all lower case so they match the standard HTML/CSS values. "fantasy" has been included for completeness; we do not recommend its regular use. This attribute is under consideration for removal from the OME-XML schema.

Parameters:

Name	Type	Description	Default
value	string	The value to set	required

getFontFamily()

Returns the value of the FontFamily attribute.

The font family used to draw the text. [enumeration] Note: these values are all lower case so they match the standard HTML/CSS values. "fantasy" has been included for completeness; we do not recommend its regular use. This attribute is under consideration for removal from the OME-XML schema.

Returns:

Type	Description
string	The value of the attribute

resetFontFamily()

Resets the FontFamily attribute to an unset state.

The font family used to draw the text. [enumeration] Note: these values are all lower case so they match the standard HTML/CSS values. "fantasy" has been included for completeness; we do not recommend its regular use. This attribute is under consideration for removal from the OME-XML schema.

hasFontFamily()

Checks whether the optional FontFamily attribute is present.

The font family used to draw the text. [enumeration] Note: these values are all lower case so they match the standard HTML/CSS values. "fantasy" has been included for completeness; we do not recommend its regular use. This attribute is under consideration for removal from the OME-XML schema.

Returns:

Type	Description
boolean	true if the optional attribute has been set, false otherwise

setFontSize(value)

Sets the value of the FontSize attribute.

Size of the font. Units are set by FontSizeUnit.

Parameters:

Name	Type	Description	Default
value	NonNegativeInt_Type	The value to set	required

getFontSize()

Returns the value of the FontSize attribute.

Size of the font. Units are set by FontSizeUnit.

Returns:

Type	Description
NonNegativeInt_Type	The value of the attribute

resetFontSize()

Resets the FontSize attribute to an unset state.

Size of the font. Units are set by FontSizeUnit.

hasFontSize()

Checks whether the optional FontSize attribute is present.

Size of the font. Units are set by FontSizeUnit.

Returns:

Type	Description
boolean	true if the optional attribute has been set, false otherwise

setFontSizeUnit(value)

Sets the value of the FontSizeUnit attribute.

The units used for the font size.

Parameters:

Name	Type	Description	Default
value	UnitsLength_Type	The value to set	required

getFontSizeUnit()

Returns the value of the FontSizeUnit attribute.

The units used for the font size.

Returns:

Type	Description
UnitsLength_Type	The value of the attribute

resetFontSizeUnit()

Resets the FontSizeUnit attribute to an unset state.

The units used for the font size.

hasFontSizeUnit()

Checks whether the optional FontSizeUnit attribute is present.

The units used for the font size.

Returns:

Type	Description
boolean	true if the optional attribute has been set, false otherwise

setFontStyle(value)

Sets the value of the FontStyle attribute.

The style and weight applied to the text. [enumeration] This is a simplified combination of the HTML/CSS attributes font-style AND font-weight.

Parameters:

Name	Type	Description	Default
value	string	The value to set	required

getFontStyle()

Returns the value of the FontStyle attribute.

The style and weight applied to the text. [enumeration] This is a simplified combination of the HTML/CSS attributes font-style AND font-weight.

Returns:

Type	Description
string	The value of the attribute

resetFontStyle()

Resets the FontStyle attribute to an unset state.

The style and weight applied to the text. [enumeration] This is a simplified combination of the HTML/CSS attributes font-style AND font-weight.

hasFontStyle()

Checks whether the optional FontStyle attribute is present.

The style and weight applied to the text. [enumeration] This is a simplified combination of the HTML/CSS attributes font-style AND font-weight.

Returns:

Type	Description
boolean	true if the optional attribute has been set, false otherwise

setLocked(value)

Sets the value of the Locked attribute.

Controls whether the shape is locked and read only, true is locked, false is editable.

Parameters:

Name	Type	Description	Default
value	boolean	The value to set	required

getLocked()

Returns the value of the Locked attribute.

Controls whether the shape is locked and read only, true is locked, false is editable.

Returns:

Type	Description
boolean	The value of the attribute

resetLocked()

Resets the Locked attribute to an unset state.

Controls whether the shape is locked and read only, true is locked, false is editable.

hasLocked()

Checks whether the optional Locked attribute is present.

Controls whether the shape is locked and read only, true is locked, false is editable.

Returns:

Type	Description
boolean	true if the optional attribute has been set, false otherwise

setID(value)

Sets the value of the ID attribute.

No description available in the XSD standard.

Parameters:

Name	Type	Description	Default
value	ShapeID_Type	The value to set	required

getID()

Returns the value of the ID attribute.

No description available in the XSD standard.

Returns:

Type	Description
ShapeID_Type	The value of the attribute

resetID()

Resets the ID attribute to an unset state.

No description available in the XSD standard.

hasID()

Checks whether the optional ID attribute is present.

No description available in the XSD standard.

Returns:

Type	Description
boolean	true if the optional attribute has been set, false otherwise

setTheZ(value)

Sets the value of the TheZ attribute.

No description available in the XSD standard.

Parameters:

Name	Type	Description	Default
value	NonNegativeInt_Type	The value to set	required

getTheZ()

Returns the value of the TheZ attribute.

No description available in the XSD standard.

Returns:

Type	Description
NonNegativeInt_Type	The value of the attribute

resetTheZ()

Resets the TheZ attribute to an unset state.

No description available in the XSD standard.

hasTheZ()

Checks whether the optional TheZ attribute is present.

No description available in the XSD standard.

Returns:

Type	Description
boolean	true if the optional attribute has been set, false otherwise

setTheT(value)

Sets the value of the TheT attribute.

The timepoint the ROI applies to. If not specified then the ROI applies to all the timepoints of the Image. [units:none] This is numbered from 0.

Parameters:

Name	Type	Description	Default
value	NonNegativeInt_Type	The value to set	required

getTheT()

Returns the value of the TheT attribute.

The timepoint the ROI applies to. If not specified then the ROI applies to all the timepoints of the Image. [units:none] This is numbered from 0.

Returns:

Type	Description
NonNegativeInt_Type	The value of the attribute

resetTheT()

Resets the TheT attribute to an unset state.

The timepoint the ROI applies to. If not specified then the ROI applies to all the timepoints of the Image. [units:none] This is numbered from 0.

hasTheT()

Checks whether the optional TheT attribute is present.

The timepoint the ROI applies to. If not specified then the ROI applies to all the timepoints of the Image. [units:none] This is numbered from 0.

Returns:

Type	Description
boolean	true if the optional attribute has been set, false otherwise

setTheC(value)

Sets the value of the TheC attribute.

The Channel the ROI applies to. If not specified then the ROI applies to all the channels of the Image. [units:none] This is numbered from 0.

Parameters:

Name	Type	Description	Default
value	NonNegativeInt_Type	The value to set	required

getTheC()

Returns the value of the TheC attribute.

The Channel the ROI applies to. If not specified then the ROI applies to all the channels of the Image. [units:none] This is numbered from 0.

Returns:

Type	Description
NonNegativeInt_Type	The value of the attribute

resetTheC()

Resets the TheC attribute to an unset state.

The Channel the ROI applies to. If not specified then the ROI applies to all the channels of the Image. [units:none] This is numbered from 0.

hasTheC()

Checks whether the optional TheC attribute is present.

The Channel the ROI applies to. If not specified then the ROI applies to all the channels of the Image. [units:none] This is numbered from 0.

Returns:

Type	Description
boolean	true if the optional attribute has been set, false otherwise

setTransform(value)

Sets the value of the Transform element.

This is a matrix used to transform the shape. The element has 6 xsd:float attributes. If the element is present then all 6 values must be included.

Parameters:

Name	Type	Description	Default
value	AffineTransform_Type	The value to set	required

getTransform()

Returns the value of the Transform element.

This is a matrix used to transform the shape. The element has 6 xsd:float attributes. If the element is present then all 6 values must be included.

Returns:

Type	Description
AffineTransform_Type	The value of the element

resetTransform()

Resets the Transform element to an unset state.

This is a matrix used to transform the shape. The element has 6 xsd:float attributes. If the element is present then all 6 values must be included.

hasTransform()

Checks whether the optional Transform element is present.

This is a matrix used to transform the shape. The element has 6 xsd:float attributes. If the element is present then all 6 values must be included.

Returns:

Type	Description
boolean	true if the optional attribute has been set, false otherwise

setAnnotationRef_List(value)

Sets the list of AnnotationRef elements.

No description available in the XSD standard.

Parameters:

Name	Type	Description	Default
value	List[AnnotationRef]	The new list of AnnotationRef elements	required

getAnnotationRef_List()

Returns the list of AnnotationRef elements.

No description available in the XSD standard.

Returns:

Type	Description
List[AnnotationRef]	The list of AnnotationRef elements

addToAnnotationRef_List(value)

Adds a new AnnotationRef element to this object.

No description available in the XSD standard.

Parameters:

Name	Type	Description	Default
value	AnnotationRef	The element to add	required

clearAnnotationRef_List()

Clear the list of AnnotationRef.

No description available in the XSD standard.