PlateAcquisition¶
Bases: NBOBaseClass
Represents the XML element PlateAcquisition.
PlateAcquisition is used to describe a single Acquisition run for a plate. This object is used to record the set of images acquired in a single Acquisition run. The Images for this run are linked to PlateAcquisition through WellSample.
fromBase(base)
staticmethod
¶
Cast a NBOBaseClass to a CMOS.
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
base
|
NBOBaseClass
|
The base class to cast |
required |
Returns:
| Type | Description |
|---|---|
PlateAcquisition
|
The casted element, or nullptr if the cast fails |
getTypeName()
¶
Returns the class type name.
Returns:
| Type | Description |
|---|---|
string
|
The class type name |
getXMLName()
¶
Returns the XML element name corresponding to this class.
Returns:
| Type | Description |
|---|---|
string
|
The XML element name |
getNBOType()
¶
Returns the NBO Type corresponding to this class.
Returns:
| Type | Description |
|---|---|
int
|
The NBO Type value |
getChildren()
¶
Returns a list of all classes derived from this class.
Returns:
| Type | Description |
|---|---|
List[NBOBaseClass]
|
The list of derived classes |
getSubElements()
¶
Returns a list of all child elements contained in this class.
Returns:
| Type | Description |
|---|---|
List[NBOBaseClass]
|
The list of child classes |
fromJsonFile(path, validate=True)
¶
Populates this object from a JSON file.
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
path
|
string
|
The path to the JSON file |
required |
validate
|
(boolean, optional)
|
If true, validates constraints on value. Default is true. |
True
|
fromJsonString(json_string, validate=True)
¶
Populates this object from a JSON string.
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
json_string
|
string
|
The JSON content as a string |
required |
validate
|
(boolean, optional)
|
If true, validates constraints on value. Default is true. |
True
|
fromXmlFile(path, validate=True)
¶
Populates this object from a XML file.
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
path
|
string
|
The path to the XML file |
required |
validate
|
(boolean, optional)
|
If true, validates constraints on value. Default is true. |
True
|
fromXmlString(xml_string, validate=True)
¶
Populates this object from a XML string.
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
xml_string
|
string
|
The XML content as a string |
required |
validate
|
(boolean, optional)
|
If true, validates constraints on value. Default is true. |
True
|
toXmlFile(filename, validate=True)
¶
Serializes this object to an XML file.
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
filename
|
string
|
The path to the output XML file |
required |
validate
|
(boolean, optional)
|
If true, validates constraints on value. Default is true. |
True
|
toXmlString(validate=True)
¶
Serializes this object to an XML string.
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
validate
|
(boolean, optional)
|
If true, validates constraints on value. Default is true. |
True
|
Returns:
| Type | Description |
|---|---|
string
|
A string containing the XML representation of this object |
setID(value, validate=True)
¶
Sets the value of the ID attribute.
No description available in the XSD standard.
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
value
|
PlateAcquisitionID_Type
|
The value to set |
required |
validate
|
(boolean, optional)
|
If true, validates constraints on value. Default is true. |
True
|
getID()
¶
Returns the value of the ID attribute.
No description available in the XSD standard.
Returns:
| Type | Description |
|---|---|
PlateAcquisitionID_Type
|
The value of the attribute |
resetID()
¶
Resets the ID attribute to an unset state.
No description available in the XSD standard.
hasID()
¶
Checks whether the optional ID attribute is present.
No description available in the XSD standard.
Returns:
| Type | Description |
|---|---|
boolean
|
true if the optional attribute has been set, false otherwise |
setName(value, validate=True)
¶
Sets the value of the Name attribute.
No description available in the XSD standard.
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
value
|
string
|
The value to set |
required |
validate
|
(boolean, optional)
|
If true, validates constraints on value. Default is true. |
True
|
getName()
¶
Returns the value of the Name attribute.
No description available in the XSD standard.
Returns:
| Type | Description |
|---|---|
string
|
The value of the attribute |
resetName()
¶
Resets the Name attribute to an unset state.
No description available in the XSD standard.
hasName()
¶
Checks whether the Name attribute is present.
No description available in the XSD standard.
Returns:
| Type | Description |
|---|---|
boolean
|
true if the attribute has been set, false otherwise |
getNameAllowedValues()
staticmethod
¶
Returns the allowed values for this attribut.
No description available in the XSD standard.
Returns:
| Type | Description |
|---|---|
std::set< str,std::less< str >,std::allocator< str > >
|
The list of allowed values |
setEndTime(value, validate=True)
¶
Sets the value of the EndTime attribute.
Time when the last Image of this Acquisition was collected
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
value
|
string
|
The value to set |
required |
validate
|
(boolean, optional)
|
If true, validates constraints on value. Default is true. |
True
|
getEndTime()
¶
Returns the value of the EndTime attribute.
Time when the last Image of this Acquisition was collected
Returns:
| Type | Description |
|---|---|
string
|
The value of the attribute |
resetEndTime()
¶
Resets the EndTime attribute to an unset state.
Time when the last Image of this Acquisition was collected
hasEndTime()
¶
Checks whether the EndTime attribute is present.
Time when the last Image of this Acquisition was collected
Returns:
| Type | Description |
|---|---|
boolean
|
true if the attribute has been set, false otherwise |
getEndTimeAllowedValues()
staticmethod
¶
Returns the allowed values for this attribut.
Time when the last Image of this Acquisition was collected
Returns:
| Type | Description |
|---|---|
std::set< str,std::less< str >,std::allocator< str > >
|
The list of allowed values |
setStartTime(value, validate=True)
¶
Sets the value of the StartTime attribute.
Time when the first Image of this Acquisition was collected
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
value
|
string
|
The value to set |
required |
validate
|
(boolean, optional)
|
If true, validates constraints on value. Default is true. |
True
|
getStartTime()
¶
Returns the value of the StartTime attribute.
Time when the first Image of this Acquisition was collected
Returns:
| Type | Description |
|---|---|
string
|
The value of the attribute |
resetStartTime()
¶
Resets the StartTime attribute to an unset state.
Time when the first Image of this Acquisition was collected
hasStartTime()
¶
Checks whether the StartTime attribute is present.
Time when the first Image of this Acquisition was collected
Returns:
| Type | Description |
|---|---|
boolean
|
true if the attribute has been set, false otherwise |
getStartTimeAllowedValues()
staticmethod
¶
Returns the allowed values for this attribut.
Time when the first Image of this Acquisition was collected
Returns:
| Type | Description |
|---|---|
std::set< str,std::less< str >,std::allocator< str > >
|
The list of allowed values |
setMaximumFieldCount(value, validate=True)
¶
Sets the value of the MaximumFieldCount attribute.
The maximum number of fields (well samples) in any well in this PlateAcquisition. This is only used to speed up user interaction by stopping the reading of every well sample.
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
value
|
PositiveInt_Type
|
The value to set |
required |
validate
|
(boolean, optional)
|
If true, validates constraints on value. Default is true. |
True
|
getMaximumFieldCount()
¶
Returns the value of the MaximumFieldCount attribute.
The maximum number of fields (well samples) in any well in this PlateAcquisition. This is only used to speed up user interaction by stopping the reading of every well sample.
Returns:
| Type | Description |
|---|---|
PositiveInt_Type
|
The value of the attribute |
resetMaximumFieldCount()
¶
Resets the MaximumFieldCount attribute to an unset state.
The maximum number of fields (well samples) in any well in this PlateAcquisition. This is only used to speed up user interaction by stopping the reading of every well sample.
hasMaximumFieldCount()
¶
Checks whether the optional MaximumFieldCount attribute is present.
The maximum number of fields (well samples) in any well in this PlateAcquisition. This is only used to speed up user interaction by stopping the reading of every well sample.
Returns:
| Type | Description |
|---|---|
boolean
|
true if the optional attribute has been set, false otherwise |
setDescription(value, validate=True)
¶
Sets the value of the Description element.
A description for the PlateAcquisition.
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
value
|
PlateAcquisition_InlineDescription
|
The value to set |
required |
validate
|
(boolean, optional)
|
If true, validates constraints on value. Default is true. |
True
|
getDescription()
¶
Returns the value of the Description element.
A description for the PlateAcquisition.
Returns:
| Type | Description |
|---|---|
PlateAcquisition_InlineDescription
|
The value of the element |
resetDescription()
¶
Resets the Description element to an unset state.
A description for the PlateAcquisition.
hasDescription()
¶
Checks whether the optional Description element is present.
A description for the PlateAcquisition.
Returns:
| Type | Description |
|---|---|
boolean
|
true if the optional attribute has been set, false otherwise |
setWellSampleRef_List(value, validate=True)
¶
Sets the list of WellSampleRef elements.
No description available in the XSD standard.
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
value
|
List[WellSampleRef]
|
The new list of WellSampleRef elements |
required |
validate
|
(boolean, optional)
|
If true, validates constraints on value. Default is true. |
True
|
getWellSampleRef_List()
¶
Returns the list of WellSampleRef elements.
No description available in the XSD standard.
Returns:
| Type | Description |
|---|---|
List[WellSampleRef]
|
The list of WellSampleRef elements |
addToWellSampleRef_List(value, validate=True)
¶
Adds a new WellSampleRef element to this object.
No description available in the XSD standard.
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
value
|
WellSampleRef
|
The element to add |
required |
validate
|
(boolean, optional)
|
If true, validates constraints on value. Default is true. |
True
|
clearWellSampleRef_List()
¶
Clear the list of WellSampleRef.
No description available in the XSD standard.
setAnnotationRef_List(value, validate=True)
¶
Sets the list of AnnotationRef elements.
No description available in the XSD standard.
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
value
|
List[AnnotationRef]
|
The new list of AnnotationRef elements |
required |
validate
|
(boolean, optional)
|
If true, validates constraints on value. Default is true. |
True
|
getAnnotationRef_List()
¶
Returns the list of AnnotationRef elements.
No description available in the XSD standard.
Returns:
| Type | Description |
|---|---|
List[AnnotationRef]
|
The list of AnnotationRef elements |
addToAnnotationRef_List(value, validate=True)
¶
Adds a new AnnotationRef element to this object.
No description available in the XSD standard.
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
value
|
AnnotationRef
|
The element to add |
required |
validate
|
(boolean, optional)
|
If true, validates constraints on value. Default is true. |
True
|
clearAnnotationRef_List()
¶
Clear the list of AnnotationRef.
No description available in the XSD standard.